CHANGES.txt
LICENCE
MANIFEST.in
README.rst
requirements.txt
setup.py
continuousflex/__init__.py
continuousflex/bibtex.py
continuousflex/constants.py
continuousflex/wizards.py
continuousflex/protocols/__init__.py
continuousflex/protocols/convert.py
continuousflex/protocols/data.py
continuousflex/protocols/protocol_apply_volumeset_alignment.py
continuousflex/protocols/protocol_batch_cluster.py
continuousflex/protocols/protocol_batch_cluster_heteroflow.py
continuousflex/protocols/protocol_batch_cluster_vol.py
continuousflex/protocols/protocol_denoise_volumes.py
continuousflex/protocols/protocol_heteroflow.py
continuousflex/protocols/protocol_heteroflow_dimred.py
continuousflex/protocols/protocol_histogram_matching.py
continuousflex/protocols/protocol_image_synthesize.py
continuousflex/protocols/protocol_missing_wedge_filling.py
continuousflex/protocols/protocol_nma.py
continuousflex/protocols/protocol_nma_alignment.py
continuousflex/protocols/protocol_nma_alignment_vol.py
continuousflex/protocols/protocol_nma_base.py
continuousflex/protocols/protocol_nma_choose.py
continuousflex/protocols/protocol_nma_dimred.py
continuousflex/protocols/protocol_nma_dimred_vol.py
continuousflex/protocols/protocol_pdb_dimred.py
continuousflex/protocols/protocol_structure_mapping.py
continuousflex/protocols/protocol_subtomogram_averaging.py
continuousflex/protocols/protocol_subtomogram_refine_alignment.py
continuousflex/protocols/protocol_subtomograms_classify.py
continuousflex/protocols/protocol_subtomogrmas_synthesize.py
continuousflex/protocols/pdb/__init__.py
continuousflex/protocols/pdb/protocol_convert_pdb.py
continuousflex/protocols/pdb/protocol_pseudoatoms.py
continuousflex/protocols/pdb/protocol_pseudoatoms_base.py
continuousflex/protocols/utilities/OF_plots.py
continuousflex/protocols/utilities/__init__.py
continuousflex/protocols/utilities/bm4d.py
continuousflex/protocols/utilities/bm4d_wrapper.m
continuousflex/protocols/utilities/dynamo.py
continuousflex/protocols/utilities/mwr_wrapper.m
continuousflex/protocols/utilities/mwr_wrapper.py
continuousflex/protocols/utilities/optflow_run.py
continuousflex/protocols/utilities/spider_files3.py
continuousflex/protocols/utilities/tombox.py
continuousflex/protocols/utilities/mwr/README.md
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continuousflex/protocols/utilities/mwr/example_proteasome.m
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continuousflex/protocols/utilities/mwr/utils/volxyz.m
continuousflex/protocols/utilities/mwr/utils/volxyzColor.m
continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/Legal_Notice.txt
continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/README.txt
continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/SheppLogan3D.mat
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continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/demo_denoising.m
continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/demo_reconstruction.m
continuousflex/protocols/utilities/mwr/utils/BM4D_v3p2/helper.m
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continuousflex/protocols/utilities/mwr/utils/freezeColors/freezeColors.m
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continuousflex/protocols/utilities/mwr/utils/freezeColors/unfreezeColors.m
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continuousflex/protocols/utilities/mwr/utils/freezeColors/demo/html/__init__.py
continuousflex/protocols/utilities/mwr/utils/freezeColors/demo/html/freezeColors_pub.html
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continuousflex/protocols/utilities/mwr/utils/freezeColors/test/__init__.py
continuousflex/protocols/utilities/mwr/utils/freezeColors/test/test_main.m
continuousflex/protocols/utilities/spider_matlab/__init__.py
continuousflex/protocols/utilities/spider_matlab/doc001.txt
continuousflex/protocols/utilities/spider_matlab/example.html
continuousflex/protocols/utilities/spider_matlab/example.m
continuousflex/protocols/utilities/spider_matlab/imshow3D.m
continuousflex/protocols/utilities/spider_matlab/license.txt
continuousflex/protocols/utilities/spider_matlab/newdoc.txt
continuousflex/protocols/utilities/spider_matlab/readSPIDERdoc.m
continuousflex/protocols/utilities/spider_matlab/readSPIDERfile.m
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continuousflex/tests/__init__.py
continuousflex/tests/test_structure_mapping.py
continuousflex/tests/test_workflow_HEMNMA.py
continuousflex/tests/test_workflow_HEMNMA3D.py
continuousflex/tests/test_workflow_StA.py
continuousflex/tests/test_workflow_TomoFlow.py
continuousflex/tests/test_workflow_subtomogram_synthesize.py
continuousflex/viewers/__init__.py
continuousflex/viewers/nma_plotter.py
continuousflex/viewers/plotter.py
continuousflex/viewers/plotter_vol.py
continuousflex/viewers/viewer_heteroflow.py
continuousflex/viewers/viewer_heteroflow_dimred.py
continuousflex/viewers/viewer_image_synthesize.py
continuousflex/viewers/viewer_nma.py
continuousflex/viewers/viewer_nma_alignment.py
continuousflex/viewers/viewer_nma_alignment_vol.py
continuousflex/viewers/viewer_nma_dimred.py
continuousflex/viewers/viewer_nma_dimred_vol.py
continuousflex/viewers/viewer_pdb_dimred.py
continuousflex/viewers/viewer_structure_mapping.py
continuousflex/viewers/viewer_subtomograms_classify.py
continuousflex/viewers/viewer_subtomograms_synthesize.py
continuousflex/viewers/nma_gui/__init__.py
continuousflex/viewers/nma_gui/matplotlib_point_path.py
continuousflex/viewers/nma_gui/matplotlib_point_selector.py
continuousflex/viewers/nma_gui/tk_clustering.py
continuousflex/viewers/nma_gui/tk_trajectories.py
continuousflex/viewers/nma_vol_gui/PointPathVol.py
continuousflex/viewers/nma_vol_gui/PointSelectorVol.py
continuousflex/viewers/nma_vol_gui/__init__.py
continuousflex/viewers/nma_vol_gui/tk_clustering_vol.py
continuousflex/viewers/nma_vol_gui/tk_trajectories_vol.py
scipion_em_continuousflex.egg-info/PKG-INFO
scipion_em_continuousflex.egg-info/SOURCES.txt
scipion_em_continuousflex.egg-info/dependency_links.txt
scipion_em_continuousflex.egg-info/entry_points.txt
scipion_em_continuousflex.egg-info/requires.txt
scipion_em_continuousflex.egg-info/top_level.txt