LICENSE
README.rst
setup.cfg
setup.py
gromacs_py/__init__.py
gromacs_py/create_peptide.py
gromacs_py/create_top.py
gromacs_py/equi_3_step.py
gromacs_py/extend.py
gromacs_py/insert_mol_no_vmd.py
gromacs_py/minimize_pdb.py
gromacs_py/minimize_pdb_and_cyclic.py
gromacs_py/prepare_prot.py
gromacs_py/prepare_prot_topo_edit.py
gromacs_py/production.py
gromacs_py/sim_pep_prot.py
gromacs_py/solvate_ions.py
gromacs_py/test_gromacs_py.py
gromacs_py/top_em_equi_3_step_prod.py
gromacs_py.egg-info/PKG-INFO
gromacs_py.egg-info/SOURCES.txt
gromacs_py.egg-info/dependency_links.txt
gromacs_py.egg-info/requires.txt
gromacs_py.egg-info/top_level.txt
gromacs_py/doc/conf.py
gromacs_py/doc/gmx_sys.rst
gromacs_py/doc/gmx_top.rst
gromacs_py/doc/index.rst
gromacs_py/doc/install.rst
gromacs_py/doc/readme.rst
gromacs_py/doc/script.rst
gromacs_py/doc/tools.rst
gromacs_py/doc/notebook/00_basic_example.ipynb
gromacs_py/gromacs/__init__.py
gromacs_py/gromacs/gmx5.py
gromacs_py/gromacs/template/equi.mdp
gromacs_py/gromacs/template/equi_charmm36.mdp
gromacs_py/gromacs/template/equi_charmm36_bilayer.mdp
gromacs_py/gromacs/template/equi_implicit_sol.mdp
gromacs_py/gromacs/template/equi_vsites.mdp
gromacs_py/gromacs/template/martini_v2.x_new-rf.mdp
gromacs_py/gromacs/template/mini.mdp
gromacs_py/gromacs/template/charmm36-jul2017.ff/atomtypes.atp
gromacs_py/gromacs/template/charmm36-jul2017.ff/cmap.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/ffbonded.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/ffnonbonded.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.doc
gromacs_py/gromacs/template/charmm36-jul2017.ff/forcefield.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/gb.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/ions.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.arn
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.c.tdb
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.hdb
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.n.tdb
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.r2b
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.rtp
gromacs_py/gromacs/template/charmm36-jul2017.ff/merged.vsd
gromacs_py/gromacs/template/charmm36-jul2017.ff/nbfix.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/old_c36_cmap.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/spc.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/spce.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/tip3p.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/tip4p.itp
gromacs_py/gromacs/template/charmm36-jul2017.ff/watermodels.dat
gromacs_py/gromacs/tools/__init__.py
gromacs_py/gromacs/tools/monitor.py
gromacs_py/test/input/1AWR-055_bestene1-mc.pdb
gromacs_py/test/input/1dpx.pdb
gromacs_py/test/input/1jd4.pdb
gromacs_py/test/input/1rxz.pdb
gromacs_py/test/input/1y0m.pdb
gromacs_py/test/input/2rri.pdb
gromacs_py/test/input/4n1m.pdb
gromacs_py/test/input/5vav.pdb